Okay let's go through the steps needed to install Klipfolio on a thumb drive. This is the easiest way I can think of.
After you have installed Klipfolio (or with your current installation):
1) Copy the KlipFolio directory to your desktop (for example). Do not just drag and drop, copy and paste.
2) Uninstall Klipfolio from Control Panel-Add and Remove programs. You can remove everything since everything you need is in the Klipfolio directory.
3) Create this batch file in your Klipfolio folder:
start klipfolio.exe /NOINSTALL
or just download the attachment from my guide here.
4) Execute the batch file (klipfolio.bat) whenever you want to run klipfolio. If you want, you can create a shortcut to klipfolio.bat and send it to your desktop. Similarly you can put the shortcut in your startup folder so that KF starts every time you start up (as long as your thumb drive is there that is).
5) The directory you created on your desktop (or whereever) is now your harddisk copy of klipfolio. If you want to run it from your thumb drive, just copy the directory to your thumb drive and run the batch file when you want to start klipfolio.
Easy as Pie.
If you want your OS to recognise klips, follow the suggestions provided here by jscott. The easiest way is to just use "save as" when clicking on new klips, and then putting the files into your "myklips" directory yourself.
